Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66287g00001 AATGGCTTTGATGAGTCTACTTCATGCACACATGCCTTTCGAGTCCTAAAACATTTGATCCAGCGGTGCCTTTCAGATGCAGTCACATCTGGAAATGTTTTTGCTGATGCAATATTGCAACAYCTGTATAGATGGCTTTGCAGCCCTCAATCAAAACTTCATGATCCCGCGCTTCACCAGTTACTCCACAAGGTCATGCAAAAGGTCTTTGCGTTGTTGTTGGCAGAGTTCCGCAAGTTGGGTGCAACAATTGTTTTTGCAAACTTCTCGAAGATTATTATAGACACGGGAAAATATGATTTGTCTACAGCCAAAGCATACTGTGATAGTTTGTTAAAAACTATACAATCTAGGTCGGTCTTGCAGAAGCCATAA 375 0.4133 NGFDESTSCTHAFRVLKHLIQRCLSDAVTSGNVFADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSTAKAYCDSLLKTIQSRSVLQKP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66287g00001 124 SMART DUF1744_2 1 123 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Trme66287g00001 124 Pfam Domain of unknown function (DUF1744) 3 121 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Trme66287g00001 124 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 3 122 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66287g00001 1 122 Core DNA Replication Machinery Family AT2G27120 65.854 2.70e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66287g00001 K02324 - gmx:100812003 224.172