Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6617g00001 ATGGTGCAGAACATGCTGAGCTCAACTAGACTCAAAGAGTTTAAAAGTGTTAGAGAAGATGCAATGGATAAATTCATCAATAGGCTTAAAGTTAATGCAGAGAAGAATAATGGTGTTGTTGTGGTTGTTAGAGATGCAAGGTTTGCTGTTTTTTGCATACTGGTTGTTATGTGTTTTGGTTTAGAAATGGATGAAGAAAAACTTGAAAGAATAGATCAGGTTATGAAAAATGTTCTAATCGTTTTAGATCCAAGAATTGATGATTATCTACCAATCCTAAGCGTGTTTTTCTCTAAACAAAGAAAACGAGCTTTAGAAGTTCGCAAAGAACAAGTCGACTTCATAGTTCCTTTCATTGAACAAAGAAGGAGAGCAATTCAAAATCCAGGATCAGATCAAACAGCTATAACTTTTTCATATTTAGACACACTTTTTGATGTCAAAGTTCATGAAGGTAAAAAATCATCACCTTCTAATGAAGAATTGGTTTCACTTATCTCAGAGTTTCTCAATGGAGGAACAGATACAACAGCAACTGCAGTTGAATGGGGGATAGCACAACTCATTGACAATCCTGAGGTTCAAACAAAACTTTATCAAGAAATTAATATGACAGTTGGAGATAAAAAAGTGAATGAAAAAGATATTGAGAAAATGCCTTATTTACAAGCTGTGGTGAAAGAGTTATTAAGGAAGCATCCTCCAACACATTTTGTACTAACACATGCTGTGACTGAACCTACCACATTAGGAGGATATGATATACCAACTGATACAAATGTTGAGGTTTATATAGCTGGCATAGGTGAGGACCCTAAACTGTGGTCCAACCCTGAAAAGTTTGATCCTGAAAGGTTCATTTCTAAAGGTGAGGATGCTGATATAACTGGTGTAACAGGAGTGAGAATGATGCCTTTTGGTGTTGGTAGAAGGATATGTCCTGGTTTGGCTATTGGTACTCTGCATATTAGTTTGATGTTGGCTAGGATGGTTCAGGAGTTTGAATGGACTGCTTATCCACCAGGGAAGAAGATAGATTTCACTGGAAAGTTGGAATTTACTGTTGTGATGAAAGAGTCTTTAAGAGCAGTTATCAAGCCAAGAGAATAA 1110 0.3622 MVQNMLSSTRLKEFKSVREDAMDKFINRLKVNAEKNNGVVVVVRDARFAVFCILVVMCFGLEMDEEKLERIDQVMKNVLIVLDPRIDDYLPILSVFFSKQRKRALEVRKEQVDFIVPFIEQRRRAIQNPGSDQTAITFSYLDTLFDVKVHEGKKSSPSNEELVSLISEFLNGGTDTTATAVEWGIAQLIDNPEVQTKLYQEINMTVGDKKVNEKDIEKMPYLQAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPTDTNVEVYIAGIGEDPKLWSNPEKFDPERFISKGEDADITGVTGVRMMPFGVGRRICPGLAIGTLHISLMLARMVQEFEWTAYPPGKKIDFTGKLEFTVVMKESLRAVIKPRE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6617g00001 369 SUPERFAMILY Cytochrome P450 2 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS P450 superfamily signature 304 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS P450 superfamily signature 224 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS P450 superfamily signature 172 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 Gene3D Cytochrome P450 1 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 Pfam Cytochrome P450 2 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 306 315 IPR017972 GO:0005506|GO:0016705
Trme6617g00001 369 PRINTS E-class P450 group I signature 264 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 49 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 181 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 303 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 161 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PRINTS E-class P450 group I signature 313 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme6617g00001 369 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 357 - -
Trme6617g00001 369 CDD CYP77_89 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6617g00001 Trme-Chr6617 36 1145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6617g00001 1 368 Cytochrome P450 AT3G10570 70.380 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6617g00001 K21995 - gmx:100795510 602.053