Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme66093g00001 ATGGCTGGACTTGCTGTGACATATGGCCTGAATTTAAATGGACGCTTGTCTCGCTGGATTCTTAGCTTTTGTAAGCTAGAAAATAAAATTATATCTATTGAAAGAATTTATCAGTACAGTCAAATTCCTAGTGAAGCACCACCAGTTATTGAAGAATCTCGCCCTCCGTCCTCATGGCCCGAGAATGGGACAATCCAACTAATTGATATGAAGGTTCGTTACAAGGAAAATCTTCCCTTGGTTCTTCATGGAGTATCCTGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGAACTGGCAGTGGCAAATCTACTTTGATTCAGGCCTTATTTCGACTGGTTGAACCAGCAACCGGGAGAATCCTTATAGACAACATTGATATCTCAGGAATTGGCCTTCATGA 410 0.4171 MAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIPSEAPPVIEESRPPSSWPENGTIQLIDMKVRYKENLPLVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPATGRILIDNIDISGIGLH 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme66093g00001 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 131 IPR027417 -
Trme66093g00001 136 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 136 - -
Trme66093g00001 136 FunFam Protein CBR-MRP-3 49 119 - -
Trme66093g00001 136 Gene3D - 49 136 IPR027417 -
Trme66093g00001 136 Pfam ABC transporter 82 131 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme66093g00001 Trme-Chr66093 149 847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme66093g00001 81 135 Calmodulin-binding Proteins AT2G36910 36.364 1.27e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme66093g00001 - - cam:101514243 260.381