Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme659693g00001 GGGAAAAAGGTTAGCAAAGCTCCAAAGATTCAACGTCTGGTCACTCCTTTGACACTCCAAAGGAAGCGAGCAAGAATTGCAGACAAGAAGAAGAGAATTGCGAAGGCAAAATCAGAGGCAGCAGAATATCAGAAACTCCTTGCATCCAGATTGAAGGAGCAGAGGGAACGCCGAAGTGAGAGCTTGGCGAAGAAGAGGTCTAGACTATCCACTGCTACAAAGCCAGTCACAGCTTAG 237 0.4726 GKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSTATKPVTA 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme659693g00001 78 Gene3D - 1 71 - -
Trme659693g00001 78 MobiDBLite consensus disorder prediction 51 67 - -
Trme659693g00001 78 Coils Coil 19 46 - -
Trme659693g00001 78 MobiDBLite consensus disorder prediction 51 78 - -
Trme659693g00001 78 PANTHER 40S RIBOSOMAL PROTEIN S6 3 69 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme659693g00001 Trme-Chr659693 20 256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme659693g00001 1 78 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 89.873 1.03e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme659693g00001 K02991 - sind:105176438 115.931