Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65922g00001 ATGATGTTTGTGATGTACTGCACAGAAAGATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCACGATTGTTCCCCCAGGATCGTACACCGAGACATAAAATCAAGCAATATTTTGCTCGATGGAAAATTGGATGCTCGGGTTTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACTACAATTGTTGCTGGAACATTCGGTTATCTAGCTCCAG 271 0.4317 MMFVMYCTERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIVHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65922g00001 90 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 90 - -
Trme65922g00001 90 FunFam Os07g0541700 protein 1 84 - -
Trme65922g00001 90 Pfam Protein kinase domain 14 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65922g00001 90 Gene3D Transferase(Phosphotransferase) domain 1 4 90 - -
Trme65922g00001 90 SUPERFAMILY Protein kinase-like (PK-like) 11 90 IPR011009 -
Trme65922g00001 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65922g00001 90 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65922g00001 Trme-Chr65922 195 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65922g00001 9 90 Receptor kinase-like Gene Family AT2G35620 91.463 6.56e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Trme65922g00001 Pkinase 3.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65922g00001 - - tpra:123907561 165.622