Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme658707g00001 ATCTGGAGCCAGGGAATTAGGAGTGTACCTAGGAGGATCAGGGTACGCATTGCTCGCAAGAGGAATGACGATGAAGATGCCAAGGAAGAACTATACTCCCTTGTCACCGTTGTCGAAATTCCCAAGGAAGAGCTAAAAGGTTTGGGCACCAAGGTCATAGATGACGAAGATTGA 174 0.477 IWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme658707g00001 57 Gene3D - 1 57 IPR023621 -
Trme658707g00001 57 SUPERFAMILY Ribosomal protein L31e 1 29 IPR023621 -
Trme658707g00001 57 PANTHER 60S RIBOSOMAL PROTEIN L31 1 56 IPR000054 GO:0003735|GO:0005840|GO:0006412
Trme658707g00001 57 Pfam Ribosomal protein L31e 1 29 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme658707g00001 Trme-Chr658707 1 174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme658707g00001 1 57 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 77.193 1.42e-27 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme658707g00001 K02910 - gmx:100305583 99.3673