Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65649g00001 GTTAACCCCACACTCGTCAAGTCTTCCTCCGCACACATAACCACCACCACCACGACATCCATCGGAATCCTAGATGACGATCACGCTGTACAAGGTTGTATGCAACCATCAAGTTACTTGTTTCCAAGAATCCTCCCATCTAAAAAAAATCGAAAATCAAAATCAGATTTCGGTCTCATCCGTCTTCCAGAATTAATGGCAGAACCAACAAACGTCCGATCAATGTCGTTCGTTGGGACACACGAATATCTTGCACCGGAAATTGTACGTGGTGAAGGACACGGTAGTGCTGTTGATTGGTGGACATTTGGGATATTTTTATACGAGCTTTTAACCGGAACAACGCCGTTTAAAGGTAACGGAAACCGTGCTACGCTTTTCAATGTTGTAGGACAACCTTTAAAGTTTCCAGACTATCCTTCTTGTAGTCCTATTGCTAGAGATCTTATTAAAGGATTGTTGGTTAAAGAACCTCAAAAAAGATTTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACACCCATTTTTCGAAGGGGTTAATTGGGCTTTGATTCGAAGTGCTACTCCTCCTATTATACCAGAACCATTTGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTGTAGCTGCTGTTGCTGATAACAAGATTGTTGATATTGTGAGTGATAAAAATAATAGTAAGGTGCAACATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 726 0.3939 VNPTLVKSSSAHITTTTTTSIGILDDDHAVQGCMQPSSYLFPRILPSKKNRKSKSDFGLIRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLTGTTPFKGNGNRATLFNVVGQPLKFPDYPSCSPIARDLIKGLLVKEPQKRFAYKRGATEIKQHPFFEGVNWALIRSATPPIIPEPFDFSQYVSKETVVAAVADNKIVDIVSDKNNSKVQHDSSYEDFEYF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65649g00001 241 SUPERFAMILY Protein kinase-like (PK-like) 55 208 IPR011009 -
Trme65649g00001 241 FunFam Serine/threonine-protein kinase AGC1-7 70 195 - -
Trme65649g00001 241 Pfam Protein kinase domain 55 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65649g00001 241 Gene3D Transferase(Phosphotransferase) domain 1 55 195 - -
Trme65649g00001 241 SMART serkin_6 5 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65649g00001 241 PANTHER FLIPPASE KINASE 1-RELATED 2 202 - -
Trme65649g00001 241 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65649g00001 Trme-Chr65649 2 727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65649g00001 1 241 AGC Kinase Gene Family AT1G79250 65.152 1.16e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme65649g00001 Pkinase 2.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65649g00001 - - vvo:131616903 400.979