Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65579g00001 TTTGGAGTTTTGCTCAAGGAGCAAGGAGTTAAGGGCTTTTTCCGTGGATGGGTGCCAACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAGCAAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCCGAGGTTATTGCTGACATTGCACTTTGCCCATTTGAGGCTGTTAAGGTCCGTGTTCAAACTCAGCCCGGTTTCGCAAGAGGTCTGGGTGATGGTCTTCCAAAATTTGTCAAGTCTGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGACGTCAAATTCCATGGCACCAGCTGAGGCATTTTAGTTTGCACATCATTATTTTACCAATTTATCATGTTGCTTCTCATGTGATGCTTGTTGGCCATGTAGCACTACCTTGTTGGACTTATAGTCAATTTTCAAACTGA 495 0.4465 FGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPWHQLRHFSLHIIILPIYHVASHVMLVGHVALPCWTYSQFSN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65579g00001 164 Gene3D Mitochondrial carrier domain 1 151 IPR023395 -
Trme65579g00001 164 SUPERFAMILY Mitochondrial carrier 4 133 IPR023395 -
Trme65579g00001 164 ProSiteProfiles Solute carrier (Solcar) repeat profile. 54 138 IPR018108 -
Trme65579g00001 164 Pfam Mitochondrial carrier protein 3 43 IPR018108 -
Trme65579g00001 164 Pfam Mitochondrial carrier protein 57 128 IPR018108 -
Trme65579g00001 164 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 41 IPR018108 -
Trme65579g00001 164 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 143 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65579g00001 Trme-Chr65579 49 769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65579g00001 1 143 Chloroplast and Mitochondria Gene Families AT5G14040 80.420 1.02e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65579g00001 K15102 - dcr:108203279 251.521