Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65541g00001 AAAATTATCTGTCTTTCTGGTCCACCAGGAGTGGGAAAAACGAGTATTGGCCGTTCAATTGCACGTGCCTTGAACCGTAAGTTCTTCCGATTCTCTGTTGGAGGATTGGCTGATGTGGCTGAAATCAAGGGGCATCGTCGAACATATATAGGTGCTATGCCAGGAAAGATGGTACAATGCCTTAAGAATGTGGGAACAGCCAACCCTCTTGTTTTGATTGATGAGATTGACAAAGTAAGATGTCGCTAA 249 0.4418 KIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYIGAMPGKMVQCLKNVGTANPLVLIDEIDKVRCR 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65541g00001 82 Gene3D - 1 82 IPR027417 -
Trme65541g00001 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 79 IPR027417 -
Trme65541g00001 82 Pfam ATPase family associated with various cellular activities (AAA) 3 79 IPR003959 GO:0005524|GO:0016887
Trme65541g00001 82 PANTHER LON PROTEASE 1 79 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65541g00001 Trme-Chr65541 264 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65541g00001 1 79 Calmodulin-binding Proteins AT3G56690 31.250 3.67e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65541g00001 K08675 - pvy:116106956 159.073