Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65466g00001 ATGTGTCCATTAAAAGTTGATCCTAGAATTGCCATTAACATGGATCCTGTCTCACCTAAAAAGTTTGACAATCAATACTTCAAGAATCTACAACAAGGAAAAGGACTCTTCACTTCTGATCAAGTGTTGTTTACAGATTCAAGGTCAAAGGCCACAGTCAACTTATTTGCATCAAATGAAAAAGCTTTTGACAGTGCTTTTATTGCTGCTATTACTAAGTTGGGAAGGGTTGGTGTYAAAACTGGTAATCAAG 253 0.3597 MCPLKVDPRIAINMDPVSPKKFDNQYFKNLQQGKGLFTSDQVLFTDSRSKATVNLFASNEKAFDSAFIAAITKLGRVGVKTGNQ 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65466g00001 84 ProSiteProfiles Plant heme peroxidase family profile. 1 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 PANTHER - 1 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 Pfam Peroxidase 11 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 SUPERFAMILY Heme-dependent peroxidases 1 83 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 PRINTS Plant peroxidase signature 13 28 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 PRINTS Plant peroxidase signature 29 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme65466g00001 84 Gene3D Peroxidase, domain 2 2 74 - -
Trme65466g00001 84 Gene3D - 75 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65466g00001 Trme-Chr65466 107 359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65466g00001 1 83 Peroxidase AT4G30170 77.108 1.33e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65466g00001 K00430 - gmx:100804620 155.221