Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65436g00001 AAAGCTGTATATACTGCAATATGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGTTGGGTCTCTCCACACAAAAGTGGTTGACTGCTGGTGGTATGGGTACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCACGAACTTTCTTTCAAGTATGATGATTCATGCAACTCGACCATTTGTTGTGAACGAGCGGATTAAAACAAAGATTAAAGGATATGAGGTTTCTGGTAGAGTTGAGCATGTAGGTTGGTGGTCACCAACAATAGTTAGAGGTGCTGATTGCGAAGCTGTTCACATTCCTAATCACAAATTGAGTGTAAATGTTGTGAGAAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCATCTGGCTATCAGTCACATGGATGTTAACAAGATTAATGTGAGTACTCTTGGTATAGTTACATTTTGA 438 0.3995 KAVYTAIWVAAVSLFMELLGLSTQKWLTAGGMGTVLLSLAGREIFTNFLSSMMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTIVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHMDVNKINVSTLGIVTF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65436g00001 145 SUPERFAMILY Sm-like ribonucleoproteins 44 114 IPR010920 -
Trme65436g00001 145 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 137 IPR045042 -
Trme65436g00001 145 Pfam Mechanosensitive ion channel 2 128 IPR006685 GO:0016020|GO:0055085
Trme65436g00001 145 Gene3D - 1 58 - -
Trme65436g00001 145 Gene3D - 59 112 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65436g00001 Trme-Chr65436 3 705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65436g00001 1 136 Mechanosensitive Ion Channel Family AT5G10490 83.088 5.07e-80 247