Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme653g00001 AGCATAGGCCCTAGTTGCGTAGGGTGTCTGACAGAAGGGCTTCGGTTAAGAGAAACCGAATTAGTTATGGGAGACGAAAGTGACGGAAGTGATGCCAAGCTGCCCAAACAAAGTGTTGTTGAACCCGTTTTTTCAACGGACATTGTTCAATTTGAAGCTCAACCTAGTAATCCTCCTCCTCAAGCTAGTAATACTCTTGCTCTTGTTCCTACTAAGCCTTCGCCGATAGAAATCGACACAGCGGCTCACTTTGTGACTGACAAAGAAGAGAGCAATAGAGATGACTTGATTGCATGGGCTCGAGGCGTGGCGCAACAGTTAATGTTCAGCATTATAGTTAGGAGATCATCCTCCGGCGCCGATGGAAAAAAGGCTCAATTAGTGTTGGAGTGTGAGCGTAGTGGGAAATATGTGTCATCGAAAAAGAAGTTGAAATCGGATTCGACGGGAACGAGGAAATGCGAATGTCCATTCCGTCTCCGTGGTTATTACAATAAGGCTACAAAGCTATGGCGTCTAAACGTTGTGAACGGCGTGCACAACCACGAGTTGGACAAAGGGCTTGAAGGACATCTCGTGGCGGGTCGTTTGAAACCGCATGAGAGGGGGNTCGTGGCGGGTCGTTTGAAACCGCATGAGAGGGTGTTTTTGGAAGAAATGACAAAGAATGCGGTTGCTCCAAAAAATATATTGCACACTTTGAAAGATAGAGATCCGGAGAACAAAACTTCCGCAAAACAAGTATACAACGCTCGTCATAGGTACAAGGCTAAATTGAGGGCGTCGAGGACTGAAATGCAACACTTGTGCAAATATCTCGACGACAACAAATATTTTTTCAAGTATCGGACGGTTGTTGAAGATGGAGTTGAACATCTTCAGGATATTTTCTTTGCACATCCAAGGTCCGTGACTTTGTTGAACTCTTTTTCGACTGTCTTGATGATGGATTCCACCTACTCCACCAACAAGTACAAGATGCCATTATTCGAGGTGGTCGGTTTCACTTCAACCGAGAAGACTTTCAATGCTGCTTTTGCTTGGCTAAGTAACGAAAAAGAAGAGAATTTTATGTGGGCTCTACAACAATTGCGTTCTCTTTTGAGGCGTGAAGATCTTGTGCCGAAGGTGATTTTGACCGACCGGGATTTAGCATTGATGAATGCAATTCCCGTTGTATTTCCTACCACGACCGCGTTGGTTTGTCGGTTTCATGTGGAGAAGAATGTGAGCACCAAGGTAAAGGAGCTAGTGAAAGTAAGGGATGGCGAAAAGGCGTCGGTTGTGTGGGAAAAYCTTTGTAWGGCTTTTAAGAAGGTGTTGGAGTCGGCTACCGAGGGAGAGTATGTTGAAAATGTATTGGAGTTTAGGCAGCTATGTGAGAAGTGGCCTAGATTTTTGAAGTATGTTGAGGAAACTATTTTAGACACCGACAAAGAGAGGGTTGTGAGTGCTTGGGTTGACAGGTACATGCACATGGGCAGCCATACTACAAATAGAGCCGAATCGGCGCACGGTGTCTTGAAAACATACTTGACTGACGGTCTCGGTGATTTGGTGAAGGGTTTGGATATGATAAATATGATGTTAGGAAATCAGTTCACTCAAGTTCAAACTGAGTTTGGTCAGAGCATGTCGGTTGAGGAACACAGATACCGAGATAAAACTCTTTACTCTTTTTTGCTTTTTAAGATTTCTAGAGCTGCATTGGATTACATTCACACCGAGGAAAAAAGAGTTGAATTTGTTGGTATGGACAGCATGAAGTGTGGTTGTCTGATGAGGCGTAACTATGGTTTGCCATGTGCATGTTTGATTGCAAAAAAATTGCGGCACGATCAGCCCATTAGACTTGATGAGGTGTACAGACACTGGAAGACGATGTGTTTTGATTGTGAAGACGGTGGTGGCGACGTCCAGGACGATTATTCTTGCACGGCAGAGTGGCAGGCAATTCAGGAACGCTTAAGGACATCTGATATAAGCATGAAAAATAATATCAGAAATCAGCTCCGTCTCATTGCGTTTCCTGAAACCACCTCGTTGAAGCCTCCCACTAGTGACGTCAAATCAAAAGGGGCTAAAAAGAAGAAAGGGGTTCGTGCCACTGTATCCACTACTAGTAGGGAAAAGTCTCGGTGGGAGCATGTTGATGCTTTTTTTGCGGATGAACAAGCTTCGCAATCATCAAAGCCGTCTCCGTCAATTCCGTCTCCGCCAGCTCCTTTGCCTACGGTGTCCGAGGCTTCTGTAATCGGTAATTTGCAACCAATTCAAGCTTCATCTCAGCTTTTTGGCATTGACCACATGCCCACATTTATGCACCCTTTTATTGAAGATATAACTGATGTGGACGGTGATGGTTATTGTAGGTACCGTTCGGTTGCATTGTATGATAAAGGCAACCAAAATGATTTTGAGTTGATACGGCTTAACATGAACAGGGAGTTGAGATTGAACAGCGAATTGTATGTTCGTGTATTTGGGAGTGAGGACCGTTACAAATGGATCTCTGATGCATTATTCCCACCTTCGAGACAGAGAAAGAGTAATAGGAAAGCGGTTGCACCAAATGAAAAATGGTTCACTTTTCCGGATATGGGGCATATTGTAGCTACCATGTTGGATAGAGTTGTGGTTCTTTGCCTTGGCGCGTTACCGAAACACTATGTGTTGGTTAAGTTGAAAGAAGGTTGTCCGATACCTTATGCAAACCCGCAATGGAAGCGATGTTGTGAAGAACAAAGTTTGGCTTGGGAAAGTGCATTTGCGGATAAGCACCAGAGGTTTGAGGAACTTATGAGCATCGAGAGAGGCAAAATTGTTGGAAATTCGGTTGGTGAAGGTAGTAAAGATTGTCCAATGGAAATCGACTGA 2877 0.4428 SIGPSCVGCLTEGLRLRETELVMGDESDGSDAKLPKQSVVEPVFSTDIVQFEAQPSNPPPQASNTLALVPTKPSPIEIDTAAHFVTDKEESNRDDLIAWARGVAQQLMFSIIVRRSSSGADGKKAQLVLECERSGKYVSSKKKLKSDSTGTRKCECPFRLRGYYNKATKLWRLNVVNGVHNHELDKGLEGHLVAGRLKPHERGXVAGRLKPHERVFLEEMTKNAVAPKNILHTLKDRDPENKTSAKQVYNARHRYKAKLRASRTEMQHLCKYLDDNKYFFKYRTVVEDGVEHLQDIFFAHPRSVTLLNSFSTVLMMDSTYSTNKYKMPLFEVVGFTSTEKTFNAAFAWLSNEKEENFMWALQQLRSLLRREDLVPKVILTDRDLALMNAIPVVFPTTTALVCRFHVEKNVSTKVKELVKVRDGEKASVVWENLCXAFKKVLESATEGEYVENVLEFRQLCEKWPRFLKYVEETILDTDKERVVSAWVDRYMHMGSHTTNRAESAHGVLKTYLTDGLGDLVKGLDMINMMLGNQFTQVQTEFGQSMSVEEHRYRDKTLYSFLLFKISRAALDYIHTEEKRVEFVGMDSMKCGCLMRRNYGLPCACLIAKKLRHDQPIRLDEVYRHWKTMCFDCEDGGGDVQDDYSCTAEWQAIQERLRTSDISMKNNIRNQLRLIAFPETTSLKPPTSDVKSKGAKKKKGVRATVSTTSREKSRWEHVDAFFADEQASQSSKPSPSIPSPPAPLPTVSEASVIGNLQPIQASSQLFGIDHMPTFMHPFIEDITDVDGDGYCRYRSVALYDKGNQNDFELIRLNMNRELRLNSELYVRVFGSEDRYKWISDALFPPSRQRKSNRKAVAPNEKWFTFPDMGHIVATMLDRVVVLCLGALPKHYVLVKLKEGCPIPYANPQWKRCCEEQSLAWESAFADKHQRFEELMSIERGKIVGNSVGEGSKDCPMEID 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme653g00001 958 Pfam Transcription factor AFT 132 184 IPR014842 GO:0000981|GO:0036086
Trme653g00001 958 Coils Coil 957 958 - -
Trme653g00001 958 MobiDBLite consensus disorder prediction 723 745 - -
Trme653g00001 958 Pfam MULE transposase domain 313 409 IPR018289 -
Trme653g00001 958 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 627 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme653g00001 Trme-Chr653 118 3523 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme653g00001 MULE 2.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme653g00001 - - tpra:123882794 1276.92