Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65346g00001 ATGGAGCCCATGGATATTGTTGCAAAGTCAAAGGAAGATGCTTCGCTTCCCAAAGCAACAATGACGAAAATTATTAAAGAGATGTTGCCCCCTGATGTTCGTGTTGCAAGAGATACCCAGGATTTGTTGATTGAATGTTGTGTAG 145 0.4138 MEPMDIVAKSKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCV 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65346g00001 48 Gene3D Histone, subunit A 5 48 IPR009072 GO:0046982
Trme65346g00001 48 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 48 IPR003958 -
Trme65346g00001 48 SUPERFAMILY Histone-fold 12 48 IPR009072 GO:0046982
Trme65346g00001 48 PANTHER PROTEIN DR1 HOMOLOG 1 48 IPR044255 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65346g00001 1 48 CCAAT-DR1 Transcription Factor Family AT5G23090 93.750 1.70e-27 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65346g00001 K21751 - pop:7490081 96.6709