Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65335g00001 ATGCAGCTGCAGGTTTTGGCTGGAGGGCTTGACTGGTTTAGTGCTGGTAGTAGAGTGATCATTACCACTCGAGACAAACACTTGCTAGAAATTCATGGGATTGAAGTAACATATGAAATAGATGAGTTTGATAAGGGAGAAGCTCTTGAATTCCTTAGGTGGAAGGCTTTTAAAAGTAAACAAGTTGACTCAAGTTACGAAAACATTTTAAACCGTGCTGTAAATTATGCTTCTGGTTTTCCATTGGCGTTAGAAGTATTAGGTTCCAACTTGTTTCGAAAGCCTATAGAAGAATGGAATTCTTTGTTGGATCAGTATGAAAAGATTCCTAATAAAAAGATTCAAAAGATACTTAAAGTGAGTTTTGATGCTTTAGAGGAAGATGAGCAGAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATCATTTGAAAGANNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNATGAAATATCATATTGGAGTGTTGGTTGAAAAATCTCTTGTAAAGATTATTGAAGATACATTTCATATGGAACCGGACTGTGTGATATTACATGACTTGATAGAAGACATGGGTAAAGAAATTGTAAGACAAGAATCACCAAATGAGCCCGGGAAACGTAGCAG 641 0.3417 MQLQVLAGGLDWFSAGSRVIITTRDKHLLEIHGIEVTYEIDEFDKGEALEFLRWKAFKSKQVDSSYENILNRAVNYASGFPLALEVLGSNLFRKPIEEWNSLLDQYEKIPNKKIQKILKVSFDALEEDEQSVFLDIACCFKGYHLKXXXXXXXXXXXXXMKYHIGVLVEKSLVKIIEDTFHMEPDCVILHDLIEDMGKEIVRQESPNEPGKRS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65335g00001 213 Gene3D - 43 126 IPR042197 -
Trme65335g00001 213 SUPERFAMILY "Winged helix" DNA-binding domain 112 205 IPR036390 -
Trme65335g00001 213 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 213 IPR044974 GO:0006952
Trme65335g00001 213 Pfam NB-ARC domain 13 124 IPR002182 GO:0043531
Trme65335g00001 213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65335g00001 Trme-Chr65335 40 680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65335g00001 8 205 WRKY Transcription Factor Family AT5G45050 32.178 1.81e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65335g00001 - - tpra:123910163 295.434