Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65321g00001 AAGCTTTTGATAGATAAGGAATCTGGTCAGTCTCTAGGATTTGCATATATTTGGTTTGTCAAGGAAGAGTCTGCGCAATTGGCTGCAAAAGAGATGAATGGAAAGTTTTTTTATGGCAGGTTTATTTATGTTACAATTGCAAATCCTGGATCATCAAAAAGTTTGAAGAAGACAACAGCCTACAAATTTTAA 192 0.3438 KLLIDKESGQSLGFAYIWFVKEESAQLAAKEMNGKFFYGRFIYVTIANPGSSKSLKKTTAYKF 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65321g00001 63 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 49 IPR000504 GO:0003723
Trme65321g00001 63 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 1 57 - -
Trme65321g00001 63 SUPERFAMILY RNA-binding domain, RBD 2 52 IPR035979 GO:0003676
Trme65321g00001 63 Gene3D - 1 61 IPR012677 -
Trme65321g00001 63 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 42 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65321g00001 Trme-Chr65321 232 526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65321g00001 1 56 Eukaryotic Initiation Factors Gene Family AT2G36660 35.714 4.21e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65321g00001 - - gmx:100791917 112.464