Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65306g00001 ATGCTCGATGCCTTATTGGCTGCAGAGGAGCTCCCTGAAGAGTATAGGGACCGTCATCAGGACATACTTTGCAATGACTGTGATCGAAAGGGCACTTCACGCTTCCACTGGCTGTATCACAAATGTGGATCTTGTGGCTCTTACAATACTCGGCTGATCAAGCGTGAGACACATTCCAGCAGCTCTTAG 189 0.4921 MLDALLAAEELPEEYRDRHQDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRLIKRETHSSSS 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65306g00001 62 Gene3D - 17 60 - -
Trme65306g00001 62 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1 59 - -
Trme65306g00001 62 FunFam RING finger and CHY zinc finger domain-containing protein 1 17 61 - -
Trme65306g00001 62 Pfam Zinc-ribbon 1 51 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65306g00001 Trme-Chr65306 266 596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65306g00001 1 57 C2H2 Transcription Factor Family AT3G18290 87.719 8.70e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65306g00001 K16276 - gmx:100776832 112.849