Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65285g00001 ATGGCGGTTAACATGCCTGGTGTTTTGGTGGTCTCTATTAAATTTGCTTGGCTTTGTTTCGCAAATGCAAGTCCTATTAGGGAAAAGATCGAGAAATGGGTGATCGATGAAGGTGAAAATAGTAAAGGAGAAAGCACTATCAAAGTCGTCATTATCGATACATCAAGTCTTGTGAGTATTGACACAGCAGGAATAACTTCTTTGGTGGAGCTGAATAAGAATCTTACTTTACATGGAGTGACATTATCCATTGCTAATCCAAGGTGGCAAGTAATTCACAAATTAAGATTGGCTAACTTTGTGAATGAAATTGGAGGAAGGGTTTTCTTGTCTGTGGGAGAAGCTATAGATGCAACAATACTTAGTGCTAAAATGGCTACCGTATAA 387 0.3824 MAVNMPGVLVVSIKFAWLCFANASPIREKIEKWVIDEGENSKGESTIKVVIIDTSSLVSIDTAGITSLVELNKNLTLHGVTLSIANPRWQVIHKLRLANFVNEIGGRVFLSVGEAIDATILSAKMATV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65285g00001 128 Pfam STAS domain 6 115 IPR002645 -
Trme65285g00001 128 SUPERFAMILY SpoIIaa-like 6 118 IPR036513 -
Trme65285g00001 128 CDD STAS_SulP_like_sulfate_transporter 6 110 - -
Trme65285g00001 128 Gene3D STAS domain 1 121 IPR036513 -
Trme65285g00001 128 ProSiteProfiles STAS domain profile. 18 119 IPR002645 -
Trme65285g00001 128 PANTHER SULFATE TRANSPORTER 7 119 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65285g00001 Trme-Chr65285 108 808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65285g00001 1 120 Inorganic Solute Cotransporters AT5G10180 50.806 2.79e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65285g00001 K17469 - gmx:100817841 165.622