Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65208g00001 ATGGCATCAGAAAGTAAAGTAGTAGAGCATCCTAAGAAGGCATTTGGATGGGCAGCTAGAGACACTACTGGTGTTCTCTCCCCTTTCAATTTTTCAAGAAGGGAAACAGGTGAGAAAGATGTAGCATTCAAGGTGTTGTATTGTGGGATATGTCACACTGATCTTCATATGATACACAATGAATGGGGCAATTCAATCTATCCATTAGTTCCAGG 215 0.4093 MASESKVVEHPKKAFGWAARDTTGVLSPFNFSRRETGEKDVAFKVLYCGICHTDLHMIHNEWGNSIYPLVPG 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65208g00001 72 PANTHER ALDEHYDE REDUCTASE 9 72 IPR047109 GO:0016616
Trme65208g00001 72 SUPERFAMILY GroES-like 10 72 IPR011032 -
Trme65208g00001 72 Gene3D - 3 72 - -
Trme65208g00001 72 Pfam Alcohol dehydrogenase GroES-like domain 39 72 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65208g00001 Trme-Chr65208 116 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65208g00001 12 72 Monolignol Biosynthesis Gene Families AT4G37990 77.049 8.23e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65208g00001 K23232 - mnt:21385909 132.494