Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65187g00001 CTGCAATCGTTCTCCAAGACGCTTAACCACCAGTCTCAGAAGCAATCAAATTCACAGCACGCAGGTGCTTTTGATTCGCAAAAGCAAAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTAATGCATCAGTTGGAGAGCACGACGCCTCACTTTATTCGCTGTATAAAGCCAAATGCAAAGCAACATCCTGGCATATATGATGAAGATCTTGTTCTCCAGCAACTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCCGGATATCCTACTCGAATGACACATCAAGAGTTTGCCAGAAGGTACGGGTTTCTGCTCTATGAAGCCTACACATCTCAAGATCCGTTGAGTGTCTCGGTTGCTGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGT 416 0.4351 MQSFSKTLNHQSQKQSNSQHAGAFDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQHPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLYEAYTSQDPLSVSVAVLQQFNIPPEMYQV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65187g00001 139 PANTHER MYOSIN 11 139 - -
Trme65187g00001 139 Gene3D - 93 139 - -
Trme65187g00001 139 ProSiteProfiles Myosin motor domain profile. 1 139 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme65187g00001 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 139 IPR027417 -
Trme65187g00001 139 MobiDBLite consensus disorder prediction 1 29 - -
Trme65187g00001 139 Pfam Myosin head (motor domain) 9 139 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme65187g00001 139 Gene3D Kinesin motor domain 6 92 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65187g00001 Trme-Chr65187 2 852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65187g00001 25 139 Myosins gene family AT5G54280 75.652 2.70e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65187g00001 K10357 - gmx:100819335 248.825