Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65180g00001 ATGGGTTCGGCCGGGTTTGATCCGGTTCATTTGGGTTCAAATGCGTTTAAACAAGCGAGTACTTTGTTGGCTTTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAAAATAATGGGTGTCTTATGCTTGGGTGGCACACGAGGTCACTCATTGCTACTTCAGCGTGGAAGCTTCCACTCATTGAGTCCAA 191 0.4974 MGSAGFDPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPLIES 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65180g00001 63 ProSiteProfiles GRAS family profile. 1 57 IPR005202 -
Trme65180g00001 63 Pfam GRAS domain family 1 57 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65180g00001 Trme-Chr65180 331 521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65180g00001 1 58 GRAS Transcription Factor Family AT3G03450 79.310 4.71e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme65180g00001 GRAS 1.7e-18 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65180g00001 K14494 - qsa:O6P43_020590 120.938