Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65162g00001 AATGAGATTCCTGTTGAGCTCATCCAAACAGTATTGAAGATGTGGCCAACAATGGATGAGGAATCAAAGCTAAAGTTATTCACAGGCGACGTTTCTCAACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTAGCTTTCAAACGTCTTGAGTCTCTACTGTTCATGTTTACACTTCCAGAAGAGGCTTCAAGCATTAAGGAATGCTTTACAACATTAGAGGTCCAAGTTTTATATAAAGAACTGCGACCACACCAGTCATATTTGACCGCAATTTCTGCAACATCAAAGGCCATGTTATGA 315 0.4127 NEIPVELIQTVLKMWPTMDEESKLKLFTGDVSQLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFTTLEVQVLYKELRPHQSYLTAISATSKAML 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65162g00001 104 SUPERFAMILY Formin homology 2 domain (FH2 domain) 3 79 - -
Trme65162g00001 104 Gene3D Formin, FH2 domain 1 91 IPR042201 -
Trme65162g00001 104 Pfam Formin Homology 2 Domain 3 79 IPR015425 -
Trme65162g00001 104 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 104 IPR015425 -
Trme65162g00001 104 PANTHER FORMIN-RELATED 1 99 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65162g00001 Trme-Chr65162 76 601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65162g00001 1 98 FH2 protein (formin) Gene Family AT5G54650 60.204 2.07e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65162g00001 - - ahf:112705264 125.946