Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme65135g00001 ATGCTTGTGTATGAATATGTGGACAATGGCAATTTAGAACAGTGGTTGCATGGGGATGTTGGACCTGTAAGCCCTTTGACATGGGAAATACGCATGAACGTTATATTAGGAACAGCAAGAGGATTGGCCTATCTTCACGAAGGTCTTGAACCTAAGGTTGTTCACCGAGATGTAAAATCAAGCAACATCCTCCTCGATCGCCAATGGAACTCCAAGGTTTCTGATTTCGGGCTTGCCAAGCTTTTGAATTCTGAGAATAGTTATGTCACGACTCGAGTAATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACGGGAATGCTTACCGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAG 423 0.4326 MLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMNVILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLNSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme65135g00001 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Trme65135g00001 141 Pfam Protein kinase domain 2 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65135g00001 141 SUPERFAMILY Protein kinase-like (PK-like) 1 136 IPR011009 -
Trme65135g00001 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65135g00001 141 PANTHER OS01G0323000 PROTEIN 1 141 - -
Trme65135g00001 141 SMART serkin_6 2 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme65135g00001 141 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Trme65135g00001 141 FunFam Putative receptor-like serine/threonine-protein kinase 7 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme65135g00001 Trme-Chr65135 16 680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme65135g00001 1 141 Receptor kinase-like Gene Family AT4G02010 57.746 3.92e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Trme65135g00001 Pkinase 7.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme65135g00001 - - tpra:123889015 291.197