Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64984g00001 ATGGATTGGCCTACTAGAATGAAAATTGCATTAGGATCAGCTAAAGGGCTTGCTTACCTTCATGAAGATTGTAGTCCTCGTATTATCCATCGTGATATTAAGGCTGCTAATGTTCTAATTGATGATAGCTTTGAAGCTAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACTGATACTAATACACATGTTTCAACCCGTGTCATGGGGACATTCGG 218 0.3991 MDWPTRMKIALGSAKGLAYLHEDCSPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDTNTHVSTRVMGTFG 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64984g00001 73 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Trme64984g00001 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme64984g00001 73 FunFam Os07g0541700 protein 1 71 - -
Trme64984g00001 73 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 73 IPR047117 -
Trme64984g00001 73 SUPERFAMILY Protein kinase-like (PK-like) 1 72 IPR011009 -
Trme64984g00001 73 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Trme64984g00001 73 Pfam Protein kinase domain 8 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64984g00001 Trme-Chr64984 201 634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64984g00001 1 73 Trihelix Transcription Factor Family AT1G23540 72.603 2.94e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Trme64984g00001 Pkinase 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64984g00001 - - gmx:100777163 145.206