Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64967g00001 TTCTTTGAACAATGTCCTTTATTTGTTTATAGGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTCGACGCTATAGGCCACGTCAGACATAAACATCTGGTGCGCTTACTTGGATTTTGCATAGAAGGAGTTCATAGGTTGCTTGTGTATGAGTATGTGAACAATGGTAACTTAGAACAATGGTTACATGGTGCAATGAGACAACATGGAGTACTTACGTGGGAAGCTCGCATGAAAGTTATTCTAGGGACAGCGAAAGCGTAA 264 0.4129 FFEQCPLFVYRGQAEKEFRVEVDAIGHVRHKHLVRLLGFCIEGVHRLLVYEYVNNGNLEQWLHGAMRQHGVLTWEARMKVILGTAKA 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64967g00001 87 SUPERFAMILY Protein kinase-like (PK-like) 13 87 IPR011009 -
Trme64967g00001 87 Pfam Protein tyrosine and serine/threonine kinase 13 86 IPR001245 GO:0004672|GO:0006468
Trme64967g00001 87 PANTHER OS01G0323000 PROTEIN 8 87 - -
Trme64967g00001 87 Gene3D Transferase(Phosphotransferase) domain 1 8 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64967g00001 Trme-Chr64967 3 437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64967g00001 12 87 Trihelix Transcription Factor Family AT1G23540 48.684 3.45e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Trme64967g00001 PK_Tyr_Ser-Thr 4.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64967g00001 - - egt:105966695 153.68