Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64949g00001 ATGGAAGGTCGAACGACGATTTTGGTAGCTCACAGGCTCGCAACTGTTCGTGATGCAGACAGCATTGCAGTGCTGCAACATGGGAAGGTTGCAGAAATGGGAAGTCATGAGAGGCTTATGGCCAAACCCAGAAGCATCTATAAACAATTGGTTAGTCTACAGCAAGAAAAGCGCCAACAAGAAGAACATTAG 192 0.4635 MEGRTTILVAHRLATVRDADSIAVLQHGKVAEMGSHERLMAKPRSIYKQLVSLQQEKRQQEEH 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64949g00001 63 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 59 IPR039421 -
Trme64949g00001 63 Gene3D - 2 62 IPR027417 -
Trme64949g00001 63 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 54 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64949g00001 Trme-Chr64949 570 761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64949g00001 3 60 Calmodulin-binding Proteins AT2G36910 50.847 3.00e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64949g00001 K05658 - gmx:100787093 108.997