Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64797g00001 ATGNTAAATGATTCTGTTCCAAACATTGAGGTTTTGAGGAAGCTTGGTGTTCCTCAAAGTTCGGTTTCCCTTTTGGTATCCAATTTTCCCAATGTTGCATTTGCCAAGCATTCTAGATTTGTTGAGGCTGTTAATTTTGTCAAGGAAATGGGGCTCGATCCTTTGAAGTCGAATTTTGTTTTGGCAGTTCAAGTGATTGTTAAGATGGACAAAGAGACTTGGGAGTCCAAATTGAAGATTTTTGAGAGGTGGGGTTGGTCGAGAGATATCTGTCTTTTGGCGTTCCAAAAGCATCCTCAAATTATGTTGACCTCAGAAAAAAAGATTCTGAAAATAATGAGTTTCTTGGTTAAGGATATGGCTCTTACACCGGAAGACATTGCTAGAAGCCCTTGGCTTCTGTACCGAAACTTGGAGAAAACACTTGTCCCTAGATGTGCAGTTGTTAAGATTTTGAAGTCAAGGGGTTTGATAAAGAGTGGTTTGCGCATAAGTAGCTTTATTGTCTTAAGTGAGAAAACATTTTTGGAGAAATATGTTACCCCATTTGAGAAAGATTTGCCACTCGTGTTGGATGCATATAAAG 586 0.3874 MXNDSVPNIEVLRKLGVPQSSVSLLVSNFPNVAFAKHSRFVEAVNFVKEMGLDPLKSNFVLAVQVIVKMDKETWESKLKIFERWGWSRDICLLAFQKHPQIMLTSEKKILKIMSFLVKDMALTPEDIARSPWLLYRNLEKTLVPRCAVVKILKSRGLIKSGLRISSFIVLSEKTFLEKYVTPFEKDLPLVLDAYK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64797g00001 195 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Trme64797g00001 195 SMART mt_12 57 87 IPR003690 GO:0003690|GO:0006355
Trme64797g00001 195 SMART mt_12 124 158 IPR003690 GO:0003690|GO:0006355
Trme64797g00001 195 SMART mt_12 23 53 IPR003690 GO:0003690|GO:0006355
Trme64797g00001 195 Pfam mTERF 8 176 IPR003690 GO:0003690|GO:0006355
Trme64797g00001 195 FunFam Mitochondrial transcription termination factor-like 1 187 - -
Trme64797g00001 195 Gene3D Transcription termination factor 3, mitochondrial 3 186 IPR038538 -
Trme64797g00001 195 PANTHER CGI-12 PROTEIN-RELATED 6 182 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64797g00001 Trme-Chr64797 134 719 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme64797g00001 mTERF 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64797g00001 K15031 - gmx:106799612 252.677