Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme64740g00001 | CAGGATGTAATAGCCTGTGATGTAATAAATCCTGACCACATCGACGTAGAGTTTGACTCCATTGGGGGACTGGCAACTATTAAAGAAGCTTTATTTGAGCTTGTTATTCTTCCCCTGAAGCGACCTGACTTGTTTTCATATGGCAAACTCCTTGGACCTCAAAAGGGGGTCCTGTTGTATGGACCCCCTGGCACTGGGAAAACCATGCTTGCCAAAGCTATTGCCAAAGAGTCAGGAGCAGTTTTCATTAATGTGAGGATATCCAACCTGATGAGCAAATGGTTCGGAGATGCTCAAAAGCTTGGTAAGTGTGTGGTATCTTTATGA | 327 | 0.4434 | QDVIACDVINPDHIDVEFDSIGGLATIKEALFELVILPLKRPDLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLGKCVVSL | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme64740g00001 | 108 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 106 | IPR027417 | - | |
Trme64740g00001 | 108 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 4 | 108 | - | - | |
Trme64740g00001 | 108 | Pfam | ATPase family associated with various cellular activities (AAA) | 57 | 100 | IPR003959 | GO:0005524|GO:0016887 | |
Trme64740g00001 | 108 | Gene3D | - | 15 | 101 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme64740g00001 | Trme-Chr64740 | 1 | 327 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme64740g00001 | 16 | 100 | Calmodulin-binding Proteins | AT3G56690 | 39.080 | 3.65e-15 | 68.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme64740g00001 | K22530 | - | vvo:131626173 | 209.149 |