Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64740g00001 CAGGATGTAATAGCCTGTGATGTAATAAATCCTGACCACATCGACGTAGAGTTTGACTCCATTGGGGGACTGGCAACTATTAAAGAAGCTTTATTTGAGCTTGTTATTCTTCCCCTGAAGCGACCTGACTTGTTTTCATATGGCAAACTCCTTGGACCTCAAAAGGGGGTCCTGTTGTATGGACCCCCTGGCACTGGGAAAACCATGCTTGCCAAAGCTATTGCCAAAGAGTCAGGAGCAGTTTTCATTAATGTGAGGATATCCAACCTGATGAGCAAATGGTTCGGAGATGCTCAAAAGCTTGGTAAGTGTGTGGTATCTTTATGA 327 0.4434 QDVIACDVINPDHIDVEFDSIGGLATIKEALFELVILPLKRPDLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLGKCVVSL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64740g00001 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 106 IPR027417 -
Trme64740g00001 108 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 4 108 - -
Trme64740g00001 108 Pfam ATPase family associated with various cellular activities (AAA) 57 100 IPR003959 GO:0005524|GO:0016887
Trme64740g00001 108 Gene3D - 15 101 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64740g00001 Trme-Chr64740 1 327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64740g00001 16 100 Calmodulin-binding Proteins AT3G56690 39.080 3.65e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64740g00001 K22530 - vvo:131626173 209.149