Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64656g00001 CCTCCAGTTCAACTTCCAAATCAATTCTCTCAGATCCCAAACCCAACTGTTCCTCAGAGAGACCCATACTTACCACCACCTATTCAATCTCAGGAAATCCAAAATCAGCAATACCAACTGCCTTTAACTCAACCAGGGGCACCTCCGCCTCAACAATATCAGCAGACCCCTCATCCTCAGTACTCTCAGCCATCGCCTCATCTACCTCAACAACAGCCACCACATTCATCTGGACCTCATCTACCTCAACAACAGCCACCTCATTCATCCGGAAATCCACCTCAAATGCAACCTTCACTAGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGAATTATCCTCCCAATCTCCGCCAGCCACCATCTCAGTCACCTAGTGGACCTCCTCCACCTTCCCAACAGTATTATGGGACACCGCCCCAAGGATATGAACCACCATCGAGTAGATCTGGTTCAAATTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGCGGGCCACCTCAGTATGGTAGTAAACAACCACAACTACCCACTGCTTCGGTGGCTTCCACCGGTGGAAGTGGTTACCCACAGCTCCCTACTGCCCGCCCACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCTGGTTCAGGTTCTCCTGGATCTGGTAACAGGGTTTCTGTCGATGATGTAGTTGATAAAGTTGCTACTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGAAATGCAGCAACA 854 0.4871 PPVQLPNQFSQIPNPTVPQRDPYLPPPIQSQEIQNQQYQLPLTQPGAPPPQQYQQTPHPQYSQPSPHLPQQQPPHSSGPHLPQQQPPHSSGNPPQMQPSLGHHLEEPPYVPSQNYPPNLRQPPSQSPSGPPPPSQQYYGTPPQGYEPPSSRSGSNYSSGYGTLSGPAEPYRYGGPPQYGSKQPQLPTASVASTGGSGYPQLPTARPLPQAIPTASAVSGGSGSGSPGSGNRVSVDDVVDKVATMGFPRDHVRATVRKLTENGQSVDLNTVLDKLMNEGGGEMQQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64656g00001 284 MobiDBLite consensus disorder prediction 180 199 - -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 214 230 - -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 110 138 - -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 139 162 - -
Trme64656g00001 284 Pfam UBA-like domain (DUF1421) 234 277 IPR010820 -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 62 93 - -
Trme64656g00001 284 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 2 281 - -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 1 236 - -
Trme64656g00001 284 PRINTS Proline rich extensin signature 47 64 - -
Trme64656g00001 284 PRINTS Proline rich extensin signature 6 27 - -
Trme64656g00001 284 PRINTS Proline rich extensin signature 82 107 - -
Trme64656g00001 284 PRINTS Proline rich extensin signature 122 134 - -
Trme64656g00001 284 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64656g00001 Trme-Chr64656 2 855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64656g00001 133 282 Trihelix Transcription Factor Family AT5G14540 56.051 1.02e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64656g00001 - - gmx:100778494 301.212