Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6460g00001 ATGTGTGGTGTGCTGAATTTGCAAGACAAGCAAAGACTTGTCCATGAGGTTGCTCGTCAATCCAAAGATGCCCCAAATATACTTCAAGCATTTACTCGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAGAAAGGAAGTACACGGGATATACTAAGGATCAGATGATAGAATATCTTCTGAAGTTAGTTTCTAAGAAATCCAACCTGCACGTTGAACAAAATGCTCTAGCTCATTCTCCTGCCAAAAGTTGCATAGGATCTAAACGGAAAAAAGGACCTCTGTCTTCTAATTTACATAATGTTCAATTAGAGAACACTAATGAGGAAACAATGAAGACCTTAGTGTGTCAGAATGTTGCATGCAAAGCTACGCTGAATCCAGAACATTCGTTTTGCAAGAGATGTTCTTGTTGTATATGTCGTTGTTACGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCACCTCTGATAATCCCAATGAAGGGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTTGCATTTTGAAGGGAAGTTGCGGTAAAACCTTGGACGGAAGCTTCTATTGTGTTTCTTGTCGAAAAATTAATGACTTAATGAG 632 0.3924 MCGVLNLQDKQRLVHEVARQSKDAPNILQAFTRRELLELICAELGKERKYTGYTKDQMIEYLLKLVSKKSNLHVEQNALAHSPAKSCIGSKRKKGPLSSNLHNVQLENTNEETMKTLVCQNVACKATLNPEHSFCKRCSCCICRCYDDNKDPSLWLTCTSDNPNEGSCGMSCHLQCALSNQMSCILKGSCGKTLDGSFYCVSCRKINDLM 210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme6460g00001 210 PANTHER VIN3-LIKE PROTEIN 2-RELATED 3 210 IPR044514 GO:0010048|GO:0040029
Trme6460g00001 210 Pfam PHD - plant homeodomain finger protein 119 210 IPR032881 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6460g00001 2 210 PHD Gene Family AT4G30200 45.064 9.74e-45 155
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6460g00001 - - psat:127101357 352.829