Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6459g00001 ATGGGGTCTCAAGTTGTTGGTGATAACAATGAAAACAATTCGCAATTCCAGCCTCTGGCACGGCAAAACTCAATGTACAATCTTACCCTTGATGAAGTTGAGAGTCAATTAGGCGACTTGGGAAAACCACTAAGTAGTATGAACCTTGACGAGCTTCTAAAAAATGTATGGACTGTTGAGACAAACCAATCCATTCGTATGGAAAATGAGAACGTAGCTCAAAACGAACAAGTTGTTTTCCAACGTCAGCCTAATCTATCGTTAAACAGTGCATTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAGCAAAGCAAAGGTGAAAGGGAGATGAATTCTCAAGAGAGACAATCTACTTTGGGAGAGATGACATTAGAGGATTTTTTGGTGGAAGCGGGCGTTGTTTCGGTTGCATCTTCTAATAGAAAGAATACTAATGATCCTAAAGTTGGCGTTGTTGATTCAAATGTACCGTTACCGCAGTTTGCACCGCATGGTCCATGGATACAATATGCACAGCCACATTTTCAGCATCCACAACAAAGTGTGATGGCGGCTTATGTTCCGAGCCAAATTATAGCAGATGGTCAGGTGGCGATGGCTGCGCCTGTGATGGGAAACTTATCTGATGCAAAGAAATCTGCGAGAAAACGGGGACCAGAGGACATGGTAGAAAGGACTGTCGAGAGGAAGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCGCGCTCAAGAGCAAGGAAACAG 756 0.4365 MGSQVVGDNNENNSQFQPLARQNSMYNLTLDEVESQLGDLGKPLSSMNLDELLKNVWTVETNQSIRMENENVAQNEQVVFQRQPNLSLNSALSKKTVDEVWRDIQQSKGEREMNSQERQSTLGEMTLEDFLVEAGVVSVASSNRKNTNDPKVGVVDSNVPLPQFAPHGPWIQYAQPHFQHPQQSVMAAYVPSQIIADGQVAMAAPVMGNLSDAKKSARKRGPEDMVERTVERKQKRMIKNRESAARSRARKQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6459g00001 252 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 252 IPR043452 GO:0003700|GO:0045893
Trme6459g00001 252 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Trme6459g00001 252 MobiDBLite consensus disorder prediction 212 252 - -
Trme6459g00001 252 MobiDBLite consensus disorder prediction 213 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6459g00001 Trme-Chr6459 406 1161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6459g00001 17 252 bZIP Transcription Factor Family AT3G56850 49.593 1.10e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6459g00001 K14432 - gmx:100811685 330.102