Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64366g00001 ACTGAGGTTAAAAGCGGAGAATCACTCAAGGTTGAGCCAGAAGATGACAAGATTATCCACCTTTCAGCGGCATGTCTGGGGGAGGTCAACAAGGATAAAGGGGGTGAACCAGTATCCCTGTATGTGAAGATTGATAATCAGAAGCTTCAACTTGGAACACTTTCTTCAGAAAAAATTCCTCAGATATCTTTTGATTTGGTATTTGAGAAGGAATTTGAGCTATCCCATAACTGGAAATATGGGAGCATCTTCTTTACTGGATTTAAAATGGAATCTCAGCTGGTTTCATATCCTTTTAGTACTATTTTATTTTGTCGTGAGATATAA 327 0.3823 TEVKSGESLKVEPEDDKIIHLSAACLGEVNKDKGGEPVSLYVKIDNQKLQLGTLSSEKIPQISFDLVFEKEFELSHNWKYGSIFFTGFKMESQLVSYPFSTILFCREI 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64366g00001 108 FunFam Histone deacetylase HDT1 1 94 - -
Trme64366g00001 108 Pfam Nucleoplasmin-like domain 2 88 IPR041232 -
Trme64366g00001 108 Gene3D Nucleoplasmin core domain 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64366g00001 Trme-Chr64366 136 558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64366g00001 2 90 C2H2 Transcription Factor Family AT3G44750 58.427 1.08e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64366g00001 - - lang:109334297 160.614