Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64354g00001 ATTGCAACTTTTGAGGAAGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGACTGCATATGAGAGTGGAAATTCAACAATTGCAAACAAGATTAATGGATGCAGATCTTATCCACTTTACAAGTTTGTGAGGGAGGAGTTGGGAACTAGTTTGCTAACCGGAGAACGAGTCATTTCACCAGGTGAAGAGTGTGACAAACTATTCACAGCTATGTCTCAGGGAAAAATCATTGATCCTCTTCTTGAATGTTTGGGAGAGTGGAACGGTGCTCCTCTTCCAATTTGTTAA 297 0.4141 IATFEEELKTLLPKEVESARTAYESGNSTIANKINGCRSYPLYKFVREELGTSLLTGERVISPGEECDKLFTAMSQGKIIDPLLECLGEWNGAPLPIC 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64354g00001 98 SUPERFAMILY L-aspartase-like 1 98 IPR008948 GO:0003824
Trme64354g00001 98 Gene3D Fumarase/aspartase (Central domain) 1 98 - -
Trme64354g00001 98 PANTHER HISTIDINE AMMONIA-LYASE 1 98 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64354g00001 Trme-Chr64354 2 298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64354g00001 1 98 Monolignol Biosynthesis Gene Families AT2G37040 72.449 8.01e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64354g00001 K10775 - gmx:100803857 176.407