Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64350g00001 ATGGAGTGCATAAAACGCAATGGCAGGTTGGTTTGGCCAGTTTTTTATCAAGTTGACCCTTCTAATGTTCGCCATCAGAAAAGGAGCTATGCAAAAGCACTTGCCAATTATGAAAGACAAAAAACCATTGACAAGGAGAAGGTCAAACAATGGAGGTCAGCTTTGGAAGAAGCAGCTAACCTATCAGGTTGGCATTTCAAACACGGGTACGAGTATGAGTTGATTGAAGAGATCGTTAAAGAAGTCTCTAAAAAGATTAATCGTAGACCTTTACATGTTGCTAAATACACTGTTGGGTTAGAGTCTCGAGTGCAAAAATTGAACTCGCTTCTAGAAGTTGAATCAAATGAGGTGGTTCAAATGGTAGGGATTTTTGGAATGGGTGGGTTAGGCAAAACAACACTTGCATGTGCCGTATACAATTGCATTGCTGATCGATTTGATAGTCTCTGTTTTCTTGCTAATGTTAGAGAAAATTCAAAGAAGTATGGGTTGGTACAAGTACAGGAGATGCTTCTTTCAGAATTAGCTGGGGAGAAAGATCTTAATTTGTGCAGTTTAAATAAAGGAATTTCTATTATAAAAAGTAGACTTTCTGGGAAAAAAATTCTATTGATTCTGGATGATGTTGACAGATTGGAGCAACTAGAAGCACTTGCTGGT 663 0.3816 MECIKRNGRLVWPVFYQVDPSNVRHQKRSYAKALANYERQKTIDKEKVKQWRSALEEAANLSGWHFKHGYEYELIEEIVKEVSKKINRRPLHVAKYTVGLESRVQKLNSLLEVESNEVVQMVGIFGMGGLGKTTLACAVYNCIADRFDSLCFLANVRENSKKYGLVQVQEMLLSELAGEKDLNLCSLNKGISIIKSRLSGKKILLILDDVDRLEQLEALAG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64350g00001 221 Gene3D - 1 83 IPR035897 -
Trme64350g00001 221 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 219 IPR044974 GO:0006952
Trme64350g00001 221 Pfam TIR domain 1 88 IPR000157 GO:0007165
Trme64350g00001 221 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 64 IPR035897 -
Trme64350g00001 221 PRINTS Disease resistance protein signature 197 211 - -
Trme64350g00001 221 PRINTS Disease resistance protein signature 121 136 - -
Trme64350g00001 221 ProSiteProfiles TIR domain profile. 1 86 IPR000157 GO:0007165
Trme64350g00001 221 Gene3D - 84 221 IPR027417 -
Trme64350g00001 221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 219 IPR027417 -
Trme64350g00001 221 Pfam NB-ARC domain 104 217 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64350g00001 Trme-Chr64350 1 768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64350g00001 9 221 WRKY Transcription Factor Family AT4G12020 29.680 6.57e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64350g00001 - - ccaj:109800328 298.516