Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64208g00001 ATGGCTGAACCTGCCTACCTTCAAATTGCTGAATATAGAGCTGGAATTGTTCCTGTGTCCTTTAGAAGGGTGCCATGTATCAAAAAGGGAGGAATAAGGTTCACAATCAATGGCCACTCTTACTTCAACCTAGTTTTGGTCACCAATGTGGGTGGTGCTGGGGATGTTCATTCAGTT 177 0.4407 MAEPAYLQIAEYRAGIVPVSFRRVPCIKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSV 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64208g00001 59 PRINTS Expansin signature 42 59 IPR002963 GO:0009664
Trme64208g00001 59 PRINTS Expansin signature 30 42 IPR002963 GO:0009664
Trme64208g00001 59 PRINTS Expansin signature 6 19 IPR002963 GO:0009664
Trme64208g00001 59 PANTHER EXPANSIN-A15 1 59 IPR002963 GO:0009664
Trme64208g00001 59 SUPERFAMILY Barwin-like endoglucanases 1 49 IPR036908 -
Trme64208g00001 59 Pfam Expansin C-terminal domain 32 59 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64208g00001 Trme-Chr64208 1 791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64208g00001 1 59 Expansin Gene Family AT2G40610 88.136 9.83e-36 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64208g00001 - K20628 qsa:O6P43_014839 118.242