Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64196g00001 TTAACACCAATGGTTCCTACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAATTGAGTGGTGAAAAATGGGCAATTGTTGATGTGTCCATAGATAAAGTAGAAGACAACATTGATGCATCCCTCGTGAAGTGCAGAAAACGACCATCTGGTTGCATTATTGAGGATAAGTCAAATGGTCATTGCAAAGTAATATGGGTAGAACACTTGGAGTGCCAAAAGAGTGCAGTTCATTCGCTGTATCGCACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGTGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCTACTGGTGAGTGA 372 0.4167 LTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSLYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64196g00001 123 ProSiteProfiles START domain profile. 1 109 IPR002913 GO:0008289
Trme64196g00001 123 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 120 IPR042160 -
Trme64196g00001 123 SUPERFAMILY Bet v1-like 2 106 - -
Trme64196g00001 123 Gene3D - 1 103 IPR023393 -
Trme64196g00001 123 Pfam START domain 2 106 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64196g00001 Trme-Chr64196 3 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64196g00001 1 122 Homeobox Transcription Factor Family AT1G79840 72.581 2.41e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64196g00001 K09338 - gmx:100809926 249.595