Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6417g00001 GTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAAACGATCCTACTCAAAAGAATACACTTCTTATTTTCAAGTTTCTCCCACTCATGATCGGCTACTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACGAATAATGTCCTGAGCACAGCTCAACAAATATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGCTGTTAATGAAAATGCTGGTGGAATTATTACTGCAGGACAAGCTAAGAGATTAGCTTCTAAGCCAGAAAGGGGTGGTGAAAGGTTTGCACAATTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAACAAGGCACTGCCAGTGGAGGAAGTTCAGCCTCTGGCTTCTGCTTCTGTTTCCAATGATGACTCAGATGTAAAAAACGACAAGGTACCATTTGTGTAG 435 0.4046 VSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVNENAGGIITAGQAKRLASKPERGGERFAQLKEEEKKKKLNKALPVEEVQPLASASVSNDDSDVKNDKVPFV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6417g00001 144 PANTHER OXA1 1 110 IPR001708 GO:0016020|GO:0032977
Trme6417g00001 144 MobiDBLite consensus disorder prediction 123 144 - -
Trme6417g00001 144 Pfam 60Kd inner membrane protein 2 65 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6417g00001 Trme-Chr6417 1 1293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6417g00001 2 121 Chloroplast and Mitochondria Gene Families AT2G28800 73.333 2.38e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6417g00001 K03217 - gmx:100813782 208.764