Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64169g00001 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCATCAAGAAAGAACAAGAACAAGGCTATTGTTAGTGAAAATGCACCTTTGTTGCCTAAAAGTCAAGCCCATGAAAGTGATTCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACCTTGAAACAGTTGGGGTTGATTCCTGGTCTTGCTGCTATACTCATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAAATTTGTGTTATTGTTAATAACATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNGAGACTATGA 459 0.3573 MTIGSLAPKTEKKKSSRKNKNKAIVSENAPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNXXXXXXXXXXXXXRL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64169g00001 152 Coils Coil 135 137 - -
Trme64169g00001 152 Coils Coil 151 152 - -
Trme64169g00001 152 PANTHER AMINO ACID TRANSPORTER 40 137 - -
Trme64169g00001 152 MobiDBLite consensus disorder prediction 1 24 - -
Trme64169g00001 152 Pfam Transmembrane amino acid transporter protein 50 137 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64169g00001 Trme-Chr64169 52 510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64169g00001 2 137 Amino Acid or Auxin Permease AAAP Family AT3G30390 55.882 3.62e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64169g00001 K14207 - vum:124822180 211.075