Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64128g00001 AAACTTAGAGACGGTAGAGAGGTTGCAATAAAATGTTTCCGTGAAGATACAGACAAAACTTCTAAGCAATTCTTGAAAGAAATTGAGATCTTAAGACACTTGCATCATCAAAATTTGGTTTCACTCTATGGCTATAGTCCTCGACGTAGCAACAAGCACATGCTAGTGTACGAGTACATCTCTAATGGAACTCTTTCACAGCATCTTCATGGATCTTCAAGCAGTAAACTATCATGGCGTACTAGATTGAATATTTCTATTGAAACTGCAAAGGCCTTGGTATATCTTCACGACTCAGGTATTATTCATCGGGACATAAAAGGAAGCAATATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGACTCTCGCGGTTTCTTCCAGAATATGTTACCCATGTTTCAACTCTTCCGGTGGGTACTCGAGGTTACATTGATCCAAACTATTATGAAACTGGAAGGGCACTGAGTGTGTCACTCTTGCCCAATTTGCAATGA 507 0.3866 KLRDGREVAIKCFREDTDKTSKQFLKEIEILRHLHHQNLVSLYGYSPRRSNKHMLVYEYISNGTLSQHLHGSSSSKLSWRTRLNISIETAKALVYLHDSGIIHRDIKGSNILLDENFTVKVADFGLSRFLPEYVTHVSTLPVGTRGYIDPNYYETGRALSVSLLPNLQ 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64128g00001 168 SUPERFAMILY Protein kinase-like (PK-like) 4 156 IPR011009 -
Trme64128g00001 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Trme64128g00001 168 Pfam Protein tyrosine and serine/threonine kinase 5 130 IPR001245 GO:0004672|GO:0006468
Trme64128g00001 168 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 157 IPR044652 GO:0004672
Trme64128g00001 168 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
Trme64128g00001 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme64128g00001 168 SMART serkin_6 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64128g00001 Trme-Chr64128 133 721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64128g00001 1 153 Receptor kinase-like Gene Family AT1G25390 60.897 1.90e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trme64128g00001 PK_Tyr_Ser-Thr 6.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64128g00001 - - mtr:25496807 272.707