Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64114g00001 ATGCATAGCATTATACAAGAAACGGCTGAGGAAATTGTTCGGGAAGAATCCATTGACGACCCTGGAAAGCAAAGTCGGCTACTAGATCCTGATGATATTTATCAAGTACTGAAAAATAACAAGGGTAGTGAGGCTATTAGAAGCATAGCTATCAACTTGTCGAAAATGAAGGAGGTGCAGTTAAATTCAAAGGTGTTTGCTAAAATGAAGAAACTACAATATCTGGATATCTATGGTAAGGGGTCCTCTTGTGATATTCTCCAGAGTCGAGGCGTTTTGTATCTTCCTCAAGGGCTTGAATCTTTGCCAAATGAACTCAGATACCTTCGGTGGGCACATTTCCCTTTGGAGTCCTTACCATCCAATTTTTCTGGAGAAAAACTAGTTCTATTGGACTTGCAAGACAGCCAA 411 0.4039 MHSIIQETAEEIVREESIDDPGKQSRLLDPDDIYQVLKNNKGSEAIRSIAINLSKMKEVQLNSKVFAKMKKLQYLDIYGKGSSCDILQSRGVLYLPQGLESLPNELRYLRWAHFPLESLPSNFSGEKLVLLDLQDSQ 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64114g00001 137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 137 IPR044974 GO:0006952
Trme64114g00001 137 SUPERFAMILY RNI-like 53 134 - -
Trme64114g00001 137 Gene3D Ribonuclease Inhibitor 32 137 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64114g00001 Trme-Chr64114 15 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64114g00001 1 136 WRKY Transcription Factor Family AT4G12020 42.647 9.86e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64114g00001 - - ccaj:109801821 186.037