Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme64068g00001 ATGTCTTACATTCTTCATTATTTTATTAGGACTCATCCTGAAATATCAATTGAACAAGGTGAAGATTTAATTGATCATGAAGATTATGAAAATGTTGGTGGTGAAATCTCTGGAACCCAAGCTGCTACTGTCTATAGTAGTGTACCAAATGTTCAGGAGCTTGAGATGCTCTTAGGAGCATACTTTGTGCAAATTGGAGCCACATTGAACAAATTATCCGCGCTAGGTGAATATGTCGAGGACACAGAGGACTACATAAACATAACATTGGATGATAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGCACTGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCACATTGACATATTTGATGCTAAAGGGAATTCAGCATTCTTTGAGACAGTTTTTGGATGCACTGCTACTTGCATAATCTTATACTTCCTTGCCATGTTTTG 476 0.3676 MSYILHYFIRTHPEISIEQGEDLIDHEDYENVGGEISGTQAATVYSSVPNVQELEMLLGAYFVQIGATLNKLSALGEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDIFDAKGNSAFFETVFGCTATCIILYFLAMF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme64068g00001 158 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 157 IPR039204 -
Trme64068g00001 158 Gene3D Magnesium transport protein CorA, transmembrane region 15 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme64068g00001 Trme-Chr64068 253 808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme64068g00001 38 157 MRS2 Gene Family AT3G19640 52.800 6.95e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme64068g00001 - - lja:Lj0g3v0356029.1 172.555