Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63986g00001 GAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGCGTCGTCTTTGTATCATCTGCAGCTGCTGTTGCTATCAATCCTAATTTCCCCAAAGATAAAGTGATCGATGAATCTTGTTGGTCTGATAAAGACTACTGCAAAAAAACTAAGAACTGGTATTATTATGCCAAGACAGAAGCAGAAGAGCAGGCCCTGAATTTCGCGAAAAGAACTGGACTTAATGTT 249 0.4137 EPAVKGTANVLEASLKAKVERVVFVSSAAAVAINPNFPKDKVIDESCWSDKDYCKKTKNWYYYAKTEAEEQALNFAKRTGLNV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63986g00001 83 Gene3D - 1 83 - -
Trme63986g00001 83 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 4 73 IPR002225 GO:0003854|GO:0006694|GO:0016616
Trme63986g00001 83 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 83 IPR036291 -
Trme63986g00001 83 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63986g00001 Trme-Chr63986 424 858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63986g00001 2 83 Monolignol Biosynthesis Gene Families AT2G33590 60.976 3.19e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63986g00001 - - lja:Lj3g3v2171530.3 135.961