Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63944g00001 GCCATTGTGGATAATTACCGGCCTCCATCTTCATGGCCTTCCAAGGGAAAGATTGATCTTCAAGGCTTAGAGATTAGATATCGCCCTAATGCTCCATTAGTCCTTAAGGGAATAACTTGTACATTTAAAGAAGGGAGTAGGGTCGGAGTTGTTGGAAGGACTGGAAGTGGTAAAAGTACACTGATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGATGAACATTTGCTCAATGGGATTGAAGGATTTGAGGATGAGGCTAAGCATAATCCCTCAAGAACCGACTCTTTTCAAAGGTAGCATTAGAACAAACCTGGACCCTCTAGGTCTGTACTCGGATGATGAAATATGGAAGGCTTTAGAGAAATGCCAGCTTAAGGAAACAATCAGCAAGCTACCAAGACTTTTGGACTCTTCTGGTCAGTCTTTAGCAACAATCTACTGA 468 0.4209 AIVDNYRPPSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGMNICSMGLKDLRMRLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISKLPRLLDSSGQSLATIY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63944g00001 155 FunFam ATP binding cassette subfamily C member 11 3 135 - -
Trme63944g00001 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 145 IPR027417 -
Trme63944g00001 155 Pfam ABC transporter 35 139 IPR003439 GO:0005524
Trme63944g00001 155 Gene3D - 2 153 IPR027417 -
Trme63944g00001 155 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 6 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63944g00001 Trme-Chr63944 2 740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63944g00001 16 146 Calmodulin-binding Proteins AT2G36910 32.593 6.20e-16 72.0