Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme639110g00001 ATGCATCATTTGGCTGGACATCCTAATGTTATATCGATTAAAGGTGCTTATGAGGATGCAGTGGCTGTTCATGTTGTGATGGAATTATGTGCAGGTGGTGAGCTTTTCGATCGGATTATTCAGCGTGGACATTATACCGAAAGAAAGGCGGCTGAACTTATTAGGACTATTGTTGGTGTTGTTGAAACTTGTCATTCTCTT 201 0.408 MHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVETCHSL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme639110g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 2 66 IPR011009 -
Trme639110g00001 67 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Trme639110g00001 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme639110g00001 67 Pfam Protein kinase domain 2 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme639110g00001 67 Gene3D Phosphorylase Kinase; domain 1 12 29 - -
Trme639110g00001 67 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme639110g00001 Trme-Chr639110 1 201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme639110g00001 1 67 EF-hand Containing Proteins AT5G04870 92.537 1.32e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme639110g00001 Pkinase 4.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme639110g00001 K13412 - twl:119980895 135.961