LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme638878g00001	GGCTGTGATGGATCAGTTCTGCTGGATGATACCAAGAATTTCACAGGGGAGAAGACAGCTCTTCCTAATATAAATTCAATCAGAGGATTTTCTGTGGTTGATGATATCAAAGCAGCTGTTGATAAAGTTTGTAAACGCCCTGTGGTCTCTTGTGCTGATATTTTAGCCATAGCAGCTCGTGATTCTGTAGC	191	0.4188	GCDGSVLLDDTKNFTGEKTALPNINSIRGFSVVDDIKAAVDKVCKRPVVSCADILAIAARDSVA	64

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme638878g00001	64	PRINTS	Plant peroxidase signature	48	58	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme638878g00001	64	PRINTS	Plant peroxidase signature	28	41	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme638878g00001	64	PANTHER	PEROXIDASE 72-RELATED	1	63	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme638878g00001	64	Pfam	Peroxidase	1	63	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme638878g00001	64	SUPERFAMILY	Heme-dependent peroxidases	1	63	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trme638878g00001	64	Gene3D	-	1	64	-	-
	Trme638878g00001	64	ProSiteProfiles	Plant heme peroxidase family profile.	1	64	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme638878g00001	Trme-Chr638878	69	259	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme638878g00001	1	63	Peroxidase	AT5G05340	73.016	2.32e-25	93.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme638878g00001	K00430		-	gmx:100811396	117.472