Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6386g00001 ATGCAGACTGAGGCGGAAATCTTGACTGATTTGAGTACTCAACTTCATTCGGAGACCATTGTTTCTGTTCAAAACGAGGATCCTGGTGTTTCAACATCTCTTGCAAATGCTGTCATATTGCCTCAGCAGCCAGCTCCGAAGAAACCAACACGGCAATGGGCTGCTTGGACTCGTCAAGAGGAGGAAAGCTTCTTCACCGCATTACGGCAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTTAGGCATTATTACTATCGGCTTGTGAGACGGATGAACAAACTTCTCGGTCCAGAATTATGTCTGGATGCCAAAAATTCAAAAGATACCAATGCTGCAATGCTTCGTTGGTAA 381 0.4383 MQTEAEILTDLSTQLHSETIVSVQNEDPGVSTSLANAVILPQQPAPKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPELCLDAKNSKDTNAAMLRW 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6386g00001 126 CDD SANT 55 98 IPR001005 -
Trme6386g00001 126 ProSiteProfiles SANT domain profile. 56 102 IPR017884 -
Trme6386g00001 126 FunFam TSL-kinase interacting protein 1 56 117 - -
Trme6386g00001 126 FunFam TSL-kinase interacting protein 1 16 105 - -
Trme6386g00001 126 SMART sant 52 100 IPR001005 -
Trme6386g00001 126 Gene3D - 2 105 - -
Trme6386g00001 126 PANTHER CRAMPED PROTEIN 37 126 - -
Trme6386g00001 126 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Trme6386g00001 126 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Trme6386g00001 126 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme6386g00001 Myb_DNA-binding 3.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6386g00001 - - psat:127074900 237.654