Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme638423g00001 ATGGTTCAAGGAACTCTTGGATACTTAGATCCGGAGTATATGCAAACACATGAATTAACTGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCCGAGCTTCTAACTGGCGAGAAACCTCTTTCTTTTAATAGGCCTGAAGAGAACACTAGTCTTGCTATGCACTTTTTGTC 176 0.3977 MVQGTLGYLDPEYMQTHELTEKSDVYSFGVVLAELLTGEKPLSFNRPEENTSLAMHFLS 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme638423g00001 59 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 59 IPR045274 GO:0007166
Trme638423g00001 59 Pfam Protein kinase domain 2 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme638423g00001 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme638423g00001 59 SUPERFAMILY Protein kinase-like (PK-like) 2 49 IPR011009 -
Trme638423g00001 59 Gene3D Transferase(Phosphotransferase) domain 1 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme638423g00001 Trme-Chr638423 1 176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme638423g00001 1 57 Receptor kinase-like Gene Family AT1G79670 70.175 9.56e-24 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trme638423g00001 Pkinase 6.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme638423g00001 - - mtr:25482306 114.39