Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63740g00001 TCTGTTGGGCAGAACCTTAAGACAAGCACTTACATTGGGGAGATAATCTTTGCTATCTTCATCGCCGTCTTTGGATTGGTCCTATTCGCATTACTTATTGGAAACATGCAGGTAATCCTTAGCAAGGAAGGACACTCAGATGATTTTAGAGATAAGGGTGAGAATAGGCAGACCGACTGA 180 0.4278 SVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQVILSKEGHSDDFRDKGENRQTD 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63740g00001 59 SUPERFAMILY Voltage-gated potassium channels 2 42 - -
Trme63740g00001 59 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 42 - -
Trme63740g00001 59 Pfam Ion transport protein 10 42 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63740g00001 Trme-Chr63740 323 502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63740g00001 1 40 Ion Channels AT2G28260 77.500 5.88e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63740g00001 K05391 - msin:131245137 67.781