Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6372g00001 GGGGAAAGCATGGAGAATGCTTTGCGAGCATGCTGCAAAGGTATCAAAATTGGTAAAATTCTTATTCATAGAGAAGGTGACAACGGCCAACAGCTAATATATGAGAAGCTGCCAAATGATATCTCAGATAGGCACGTGTTACTGCTGGATCCTATCTTAGGCACAGGTAATTCTGCCGTTCAAGCAATTTCTTTACTTTTAAAGAAGGGCGTACCAGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGATTTCCGAGGATAAAAATTGTGACATCTGAGATTGACATTGGTTTGAATGAAGATTTCCGTGTCATTCCTGGGATGGGCGAGTTTGGGGATCGGTACTTTGGAACAGATGACGATGACGAGCAGGTGGVGAGCCGTTCGAGGTAG 426 0.4366 GESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDEQVXSRSR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6372g00001 141 Gene3D - 1 129 IPR029057 -
Trme6372g00001 141 SUPERFAMILY PRTase-like 1 130 IPR029057 -
Trme6372g00001 141 Pfam Uracil phosphoribosyltransferase 1 129 - -
Trme6372g00001 141 CDD PRTases_typeI 1 102 IPR000836 -
Trme6372g00001 141 FunFam Probable uracil phosphoribosyltransferase 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6372g00001 Trme-Chr6372 370 1309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6372g00001 1 132 PRT Gene Family AT4G26510 92.424 2.90e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6372g00001 K00876 - qsa:O6P43_021350 263.077