Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63705g00001 ATGAATGTCAACACTTCCATGACAAATGTGACCGGACGCGTGATTGGGCCTCCAGCATTGAAGTTAAGTGATCCACGTGGAAAGAGTACTTCTGTCAAACTGGATGCAGAGAAATGCCATTGGAATCTACTTGGAAGGTCAATGGTAGAAGGAAAACCTGTTGAGTGTTGGGGCATCCTTGATTTTACCAGCAATGGACCTAATTGGGGCAGATTAAGAGGCAATCAGTTCGTTAACAATCTTATGGATAAGTACCGAAAGTTGGGCATTGTCATGAAGGAACCTGTTTGTTATGAGCATTCTTCAATGCAGAAACTTGGGGATTACAATTCACTTAGTGACTTACTTGAAAAAATAAATGATAGGGTTCAAAAAAACTGTCGACAGAGGCTGCAATTTCTTCTTTGTGTGATGGCCAACAGGGATCATGGTTACAAGTGCCTCAAGTGGATTGCTGAGACCAAGGTTGGCATAGTGACACAGTGCTGCTTATCTGGTAATGCTAATGAAGGGAAAGACCAATATCTCACAAATCTTGCTCTAAAAATCAATGCAAAAATTGGAGGCAGTAACGTGGAGCTCATTAATAGGCTCCCACACTTTGAGGATGAAAGTCATGTTATGTTTATAGGGGCTGATGTCAATCATCCAGGCTCTCGGGACATAGATAGTCCATCAATT 681 0.4185 MNVNTSMTNVTGRVIGPPALKLSDPRGKSTSVKLDAEKCHWNLLGRSMVEGKPVECWGILDFTSNGPNWGRLRGNQFVNNLMDKYRKLGIVMKEPVCYEHSSMQKLGDYNSLSDLLEKINDRVQKNCRQRLQFLLCVMANRDHGYKCLKWIAETKVGIVTQCCLSGNANEGKDQYLTNLALKINAKIGGSNVELINRLPHFEDESHVMFIGADVNHPGSRDIDSPSI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63705g00001 227 Gene3D - 14 195 - -
Trme63705g00001 227 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 227 - -
Trme63705g00001 227 SUPERFAMILY Ribonuclease H-like 10 218 IPR012337 -
Trme63705g00001 227 Pfam Piwi domain 135 227 IPR003165 GO:0003676
Trme63705g00001 227 ProSiteProfiles Piwi domain profile. 133 227 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63705g00001 Trme-Chr63705 1 681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63705g00001 1 227 Eukaryotic Initiation Factors Gene Family AT1G48410 30.417 5.08e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63705g00001 K11593 - gmx:100805250 360.147