Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63667g00001 ATGCATAGCAACTTAACTCGATTGGTGATGGTCTCGTGGCTCTTTCTTGTATTGATTCTCACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTTACAGTTAAACAGTTACGACCAAATGTCACGGACATTCAGTGGCTGAAGAACAATAACAAGAAAATTGGTTGTGATGGCGACTCATTTGTTAGGACGTTCTTAGAGAAAGTTGAAAAGTTCAAGCCAGAGAATATCATAAACATTACCGATGAATCCAAGTACGATGAAGCATTCGCTAATAACAGCATAACAGCTGCATTTTTTGAGCTCCCGTACGAAAAAGTATTCATCAGTGAATACTGCAAGAGATACACCGGCTTCANTCCTAGAAATAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCTCCTTTGGCAAGAGACGTTTCGAAAGCTATATTACATCTCTCGGAAAAGGCTGAACTGAAGAGATTGGAAGAAAAATGGTTAATTAACTCACAAGATTGCTCCAACAACGTGACATCCTCCAACGATANGGAGAGTTTGAATCTTGGAAGCTTATGGATTCTATATGTCATCTCTTGTGCTACTTCTACTATTTGTCTGCTAATATCAATCATCAAGCGTCTAAAATCCAATCACCGACGTGAAAACTTGCCACCAGAAGAAGGCAATGGCACACCAAGTGATGAAAGAGTGTGGAACAAGGTTCTTACATTTGCAAAGCAGATTTATAGCAAAAAGCTTGATA 751 0.3928 MHSNLTRLVMVSWLFLVLILTSSYTASLSSMLTVKQLRPNVTDIQWLKNNNKKIGCDGDSFVRTFLEKVEKFKPENIINITDESKYDEAFANNSITAAFFELPYEKVFISEYCKRYTGFXPRNRFGGLGFMFQKGSPLARDVSKAILHLSEKAELKRLEEKWLINSQDCSNNVTSSNDXESLNLGSLWILYVISCATSTICLLISIIKRLKSNHRRENLPPEEGNGTPSDERVWNKVLTFAKQIYSKKLD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63667g00001 250 Gene3D - 75 171 - -
Trme63667g00001 250 SUPERFAMILY Periplasmic binding protein-like II 20 163 - -
Trme63667g00001 250 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 213 IPR015683 -
Trme63667g00001 250 Pfam Bacterial extracellular solute-binding proteins, family 3 20 163 IPR001638 -
Trme63667g00001 250 Pfam Ligand-gated ion channel 3 196 IPR001320 GO:0015276|GO:0016020
Trme63667g00001 250 Gene3D - 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63667g00001 Trme-Chr63667 24 861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63667g00001 3 211 Ion Channels AT2G17260 35.377 1.98e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63667g00001 - - gmx:100818619 364.77